Research Articles (Mammal Research Institute)

Permanent URI for this collectionhttp://hdl.handle.net/2263/5233

A collection containing some of the full text peer-reviewed/ refereed articles published by researchers from the Mammal Research Institute

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Bacterial blood microbiome of Mastomys rodents : implications for disease spill-over at the animal-human interface within the Bushbuckridge-East community, South Africa
(Frontiers Media, 2025-02) Kolo, Agatha Onyemowo; Brayton, Kelly A.; Collins, Nicola E.; Bastos, Armanda D.S.; Matthee, Sonja; Gall, Cory A.; Wentzel, Jeanette Maria; Neves, L.C.B.G.D. (Luís); Oosthuizen, Marinda C.
The Bushbuckridge-East community in Mpumalanga Province, South Africa is bordered by nature reserves, including the Manyeleti Game Reserve. Murid rodents are prevalent in both Manyeleti and communal rangelands adjoining the community households. Although rodents are reservoir hosts for a broad range of viral, bacterial and parasitic pathogens, the rodent microbial diversity and transmission of zoonotic agents to humans in the community is understudied. In this study we investigated bacterial diversity in wild and commensal rodents sampled from different habitats. The 16S rRNA gene was amplified from DNA extracted from the blood of 24 wild Mastomys and one Steatomys sp. and subjected to PacBio circular consensus sequencing. As Bartonella species were dominant in the blood microbiome, gltA gene characterization was performed to delineate species. Rodents sampled from peri-urban and communal rangelands had higher proportions of Bartonella spp. [Hlalakahle (77.7%), Gottenburg (47.8%), Tlhavekisa (83.8%)] compared to those from the protected habitat (43.8%). Ehrlichia spp., Anaplasma spp., and Coxiella burnetii were detected at <1% of the sequence reads. Conventional PCR and sequencing validated the detection of Bartonella spp. with the first confirmation of Bartonella mastomydis infection in Mastomys in South Africa. Additionally, 317 mites, 90 fleas, 10 ticks and eight lice were collected from the rodents, providing evidence of possible vectors of the organisms detected. The detection of zoonotic agents in rodents in Bushbuckridge-East community, together with prior serological confirmation of Bartonella and Coxiella in non-malarial acute febrile patients from this community, highlights the possible risks that commensal rodents pose to human health.
Good moms : dependent young and their mothers cope better than others with longer dry season in plains zebras
(Springer, 2025-03) Thel, Lucie; Bonenfant, Christophe; Chamaillé-Jammes, Simon
In large herbivores, the timing of births often coincides with the seasonal peak of food resources availability, likely to improve juvenile survival and reduce reproduction costs. Some species, however, breed year-round, even in seasonal environments. Demographic processes, such as to what extent being born during the lean season reduces survival of juveniles and reproductive females, remain understudied in large mammals inhabiting tropical ecosystems. We investigated survival rates in plains zebras (Equus quagga) in Hwange National Park (Zimbabwe), a highly seasonal savanna ecosystem. We used capture–recapture models to analyse long-term demographic data (2008–2019). We investigated the effect of seasonality as a categorical (wet versus dry season) and continuous (duration of the dry season) variable on survival. We found little variability in early juvenile survival (φ = 0.458 ± 0.044 SE, < 6 m.o.), whereas late juvenile and yearling survivals were higher and decreased with increasing length of the dry season (from 0.850 ± 0.095 SE to 0.480 ± 0.120 SE). Female survival was high (> 0.703 ± 0.057 SE and up to 0.995 ± 0.006 SE) but decreased with exposure to the dry season in non-reproductive females. The probability of females becoming reproductive in the following year was not affected by the length of the dry season (0.423 and 0.420 for reproductive and non-reproductive females, respectively). Our results highlight the importance of individual quality in reproductive performance, as reproductive females seem to buffer the effect of environmental variability on their own survival and that of their foal.
Examining park users' support for emerald ash borer (Agrilus planipennis) control in urban parks
(Wiley, 2025-05) Green, Mitchell A.; Barnes, Brittany F.; Gandhi, Kamal J.K.; Pienaar, Elizabeth Frances
Emerald ash borer (Agrilus planipennis Fairmare; EAB) is a woodboring beetle that is considered one of the most damaging invasive forest insects in North America, causing near-complete mortality of native ash (Fraxinus spp.) trees across multiple states. Management options include both biological control using parasitoid wasps from EAB's native range, and chemical control with systemic insecticides. Although both strategies are being used to control EAB, the public's support for these methods is not well understood. In 2023, we surveyed 174 urban park users in northeastern Georgia, United States, to identify determinants of their support for EAB control. Most respondents were not previously aware of EAB and ash trees, although they valued the ecosystem services provided by park trees. Respondents were more supportive of biological control than chemical control, perceiving greater ecological and human well-being risks from chemical control. Respondents' risk perceptions pertaining to control methods and EAB, and their attitudes towards ash trees influenced their support for EAB control. Birdwatchers were less likely to support chemical control and individuals who like to sit and enjoy nature were more likely to support biological control. Our results suggest that park managers' outreach about EAB control should emphasize the aesthetic appeal and ecosystem services provided by urban ash trees and the invasion impacts of EAB. Outreach should also highlight that EAB control does not pose ecological or human well-being risks, that parasitoid wasps help to secure ecosystem function through pest control and do not pose a risk to people, and that EAB control will not adversely impact recreational activities within the park.
Falconer perceptions of, and support for, rabbit hemorrhagic disease biosecurity actions
(Utah State University, 2023) Shapiro, Hannah G.; Pienaar, Elizabeth Frances
Rabbit hemorrhagic disease virus 2 (RHDV2) is a highly contagious virus that primarily infects wild and domestic rabbits and hares (lagomorphs). In the United States, state wildlife agencies rely on stakeholders to report RHDV2-related mortalities and engage in voluntary biosecurity actions to prevent the spread of RHDV2. However, stakeholder perceptions of RHDV2 and relevant biosecurity actions have not been evaluated. We conducted the first study in the United States on how falconers’ risk perceptions, knowledge, trust in state wildlife agencies to manage RHDV2, hunting behaviors, and demographic characteristics influenced their willingness to engage in voluntary biosecurity actions and support potential government-mandated biosecurity measures. To complete our study, we surveyed 480 falconers in 45 states using an online questionnaire from April 2021 to March 2022. Most respondents were aware of RHDV2 but did not know about the multiple vectors for RHDV2 transmission or that infected lagomorphs are unlikely to show signs of disease. Most respondents were willing to engage in all voluntary biosecurity actions (52.9–89.8%) and supported 3 of the 4 RHDV2 management strategies (56.0–62.5%). Respondents’ willingness to engage in or support biosecurity measures depended on the importance they placed on biosecurity, their risk perceptions, and their trust in state wildlife agencies to manage RHDV2. Consistent, up-to-date outreach efforts should communicate the economic and hunting risks associated with RHDV2 and how falconer adoption of biosecurity behaviors may lower the risk of human-mediated RHDV2 spread. State wildlife agencies may build trust with falconry groups by actively engaging falconers in lagomorph and RHDV2 monitoring efforts and working with falconers to implement biosecurity measures that are safe for raptors while also lowering the risk of human-mediated RHDV2 spread.
Southern Ocean food-webs and climate change : a short review and future directions
(Public Library of Science, 2024-03-11) Queiros, Jose P.; Borras-Chavez, Renato; Friscourt, Noemie; Groß, Jasmin; Lewis, Candice B.; Mergard, Georgia; O’Brien, Katie
Food-webs are a critical feature of ecosystems and help us understand how communities will respond to climate change. The Southern Ocean is facing rapid and accelerating changes due to climate change. Though having evolved in an isolated and somewhat extreme environment, Southern Ocean biodiversity and food-webs are among the most vulnerable. Here, we review 1) current knowledge on Southern Ocean food-webs; 2) methods to study foodwebs; 3) assessment of current and future impacts of climate change on Southern Ocean food-webs; 4) knowledge gaps; and 5) the role of Early Career Researchers (ECRs) in future studies. Most knowledge on Southern Ocean food-webs come from the pelagic environment, both at macro- and microbial levels. Modelling and diet studies of individual species are major contributors to the food-web knowledge. These studies revealed a short food-web, predominantly sustained by Antarctic Krill (Euphausia superba). Additionally, alternative pathways exist, involving other krill species, fish, and squid, which play equally important roles in connecting primary producers with top predators. Advantages and disadvantages of several techniques used to study Southern Ocean food-webs were identified, from the classical analyses of stomach contents, scats, or boluses to the most recent approaches such as metabarcoding and trophic-biomarkers. Observations show that climate change can impact the foodweb in different ways. As an example, changes to smaller phytoplankton species can lengthen the food-web, increasing assimilation losses and/or changing nutrient cycles. Future studies need to focus on the benthic-dominated food-webs and the benthopelagic coupling. Furthermore, research during the winter season and below the ice-shelves is needed as these areas may play a crucial role in the functioning of this ecosystem. ECRs can play a significant role in advancing the study of Southern Ocean food-webs due to their willingness for interdisciplinary collaboration and proficiency in employing various methodologies, contributing to the construction of high-resolution food-webs.
Successful alien plant species exhibit functional dissimilarity from natives under varied climatic conditions but not under increased nutrient availability
(Wiley, 2025-03) Milanovic, Marija; Bakker, Jonathan D.; Biederman, Lori; Borer, Elizabeth; Catford, Jane A.; Cleland, Elsa; Hagenah, Nicole; Haider, Sylvia; Harpole, W. Stanley; Komatsu, Kimberly; MacDougall, Andrew S.; Roemermann, Christine; Seabloom, Eric W.; Knapp, Sonja; Kuehn, Ingolf
AIMS : The community composition of native and alien plant species is influenced by the environment (e.g., nutrient addition and changes in temperature or precipitation). A key objective of our study is to understand how differences in the traits of alien and native species vary across diverse environmental conditions. For example, the study examines how changes in nutrient availability affect community composition and functional traits, such as specific leaf area and plant height. Additionally, it seeks to assess the vulnerability of high-nutrient environments, such as grasslands, to alien species colonization and the potential for alien species to surpass natives in abundance. Finally, the study explores how climatic factors, including temperature and precipitation, modulate the relationship between traits and environmental conditions, shaping species success. LOCATION : In our study, we used data from a globally distributed experiment manipulating nutrient supplies in grasslands worldwide (NutNet). METHODS : We investigate how temporal shifts in the abundance of native and alien species are influenced by species-specific functional traits, including specific leaf area (SLA) and leaf nutrient concentrations, as well as by environmental conditions such as climate and nutrient treatments, across 17 study sites. Mixed-effects models were used to assess these relationships. RESULTS : Alien and native species increasing in their abundance did not differ in their leaf traits. We found significantly lower specific leaf area (SLA) with an increase in mean annual temperature and lower leaf Potassium with mean annual precipitation. For trait–environment relationships, when compared to native species, successful aliens exhibited an increase in leaf Phosphorus and a decrease in leaf Potassium with an increase in mean annual precipitation. Finally, aliens' SLA decreased in plots with higher mean annual temperatures. CONCLUSIONS: Therefore, studying the relationship between environment and functional traits may portray grasslands' dynamics better than focusing exclusively on traits of successful species, per se.
Effect of exogenous manipulation of glucocorticoid concentrations on meerkat heart rate, behaviour and vocal production
(Elsevier, 2025-02) Driscoll, Isabel; Briefer, Elodie F.; Ganswindt, Andre; Manser, Marta B.
Encoding of emotional arousal in vocalisations is commonly observed in the animal kingdom, and provides a rapid means of information transfer about an individual's affective responses to internal and external stimuli. As a result, assessing affective arousal-related variation in the acoustic structure of vocalisations can provide insight into how animals perceive both internal and external stimuli, and how this is, in turn, communicated to con- or heterospecifics. However, the underlying physiological mechanisms driving arousal-related acoustic variation remains unclear. One potential driver of such variation in behaviour and vocal production are glucocorticoids. Through exogenous glucocorticoid manipulation, we aimed to gain insight on the relationship between arousal and physiological parameters, behaviour and vocal production in wild meerkats (Suricata suricatta). To this aim, we administered glucocorticoids to wild meerkats, and recorded their heart rate, vigilance behaviour, call rate and acoustic structure during natural behavioural contexts. The results suggest that, although the glucocorticoid treatment did increase plasma glucocorticoid levels, this did not result in observable changes in heart rate, vigilance, or vocal production. This lack of treatment effect suggests that, while glucocorticoids may be a significant component and correlate of the arousal response, they are not the direct drivers of affective arousal related changes in heart rate, behaviour, or vocal production.
Feeding through the ages : revisiting the diet of meerkats
(Elsevier, 2025-03) Jubber, Walter R.; Manser, Marta B.; Fuller, Andrea
We investigated the diet and foraging behaviour of a social carnivore, the meerkat (Suricata suricatta), living in stochastic dryland, and examined seasonal, as well as age-related variation in diet. Insecta constituted the highest percentage of prey eaten (88.4%), followed by Arachnida (5.7%), Diplopoda (4.3%), and Reptilia (1.1%). Within Insecta, Coleoptera (70.4%) was the most dominant prey order in the diet, followed by Lepidoptera and Hymenoptera. There was seasonal variation in the diet of meerkats, with the three main Coleoptera families eaten year-round, but higher consumption of Coleoptera adults in the wet season than in the dry season. We found that old adult meerkats (>24 months) consumed the most large-sized prey, while sub-adults (6–10 months) had the highest prey count of small adult Carabidae beetles. Yearlings (15–24 months) ate the highest percentage of Hepialidae caterpillars. Whether the high representation of Coleoptera in the meerkat diet reflects dietary opportunism associated with the relatively high abundance of Coleoptera, or specialisation in the diet regardless of abundance, remains to be determined.
The challenges, opportunities and future of comparative physiology in the Global South : perspectives of early-career researchers
(Company of Biologists, 2024-10) Bars-Closel, Melissa; Capparelli, Mariana V.; Conradie, Shannon R.; Diele-Viegas, Luisa Maria; Donaldson, Ashleigh C.; Kosmala, Georgia K.; Madelaire, Carla B.; De Mello, Daniela M.D.; Majelantle, Tshepiso L.; Martins, Mariana F.; Moreira, Daniel C.; Ngcamphalala, Celiwe A.; Noakes, Matthew J.; Shankar, Anusha; Webster, Andrea B.
Researchers in the Global South (GS, developing countries) make valuable contributions to the field of comparative physiology, but face economic and scientific disparities and several unique challenges compared with colleagues in the Global North (developed countries). This Perspective highlights some of the challenges, knowledge gaps and disparities in opportunity faced by GS researchers, especially those at early-career stages. We propose collaborative solutions to help address these issues, and advocate for promoting investment and cultural and societal change for a more inclusive research community. Additionally, we highlight the role of GS researchers in contributing expert knowledge on local biodiversity and the environment; this knowledge can help to shape the future of comparative physiology, allowing us to achieve a better understanding of the evolution of physiological mechanisms and to develop innovative solutions to environmental and biomedical challenges. With this Perspective, we hope to highlight the need to foster a more diverse, equitable and inclusive research landscape in comparative physiology; one that empowers GS scientists to address the global challenges associated with biodiversity loss, climate change and environmental pollution.
Light sensitivity of the circadian system in the social highveld mole-rat Cryptomys hottentotus pretoriae
(Company of Biologists, 2024-09) Chanel, Pauline N.C.; Bennett, Nigel C.; Oosthuizen, Maria Kathleen
Highveld mole-rats (Cryptomys hottentotus pretoriae) are social rodents that inhabit networks of subterranean tunnels. In their natural environment, they are rarely exposed to light, and consequently their visual systems have regressed over evolutionary time. However, in the laboratory they display nocturnal activity, suggesting that they are sensitive to changes in ambient illumination. We examined the robustness of the Highveld mole-rat circadian system by assessing its locomotor activity under decreasing light intensities. Mole-rats were subjected to seven consecutive light cycles commencing with a control cycle (overhead fluorescent lighting at 150 lx), followed by decreasing LED lighting (500, 300, 100, 10 and 1 lx) on a 12 h light:12 h dark (L:D) photoperiod and finally a constant darkness (DD) cycle. Mole-rats displayed nocturnal activity under the whole range of experimental lighting conditions, with a distinct spike in activity at the end of the dark phase in all cycles. The mole-rats were least active during the control cycle under fluorescent light, locomotor activity increased steadily with decreasing LED light intensities, and the highest activity was exhibited when the light was completely removed. In constant darkness, mole-rats displayed free-running rhythms with periods (τ) ranging from 23.77 to 24.38 h, but was overall very close to 24 h at 24.07 h. Our findings confirm that the Highveld mole-rat has a higher threshold for light compared with aboveground dwelling rodents, which is congruent with previous neurological findings, and has implications for behavioural rhythms.
Evolutionary shifts in the thermal biology of a subterranean mammal : the effect of habitat aridity
(Company of Biologists, 2024-12) Merchant, Hana N.; Hart, Daniel William; Bennett, Nigel C.; Janse van Vuuren, Andries Koch; Freeman, Marc Trevor; McKechnie, Andrew E.; Faulkes, Chris G.; Mordaunt, Nathan D.; Portugal, Steven J.
Subterranean mammals representing a single subspecies occurring along an aridity gradient provide an appropriate model for investigating adaptive variation in thermal physiology with varying levels of precipitation and air temperature. This study examined the thermal physiological adaptations of common mole-rats (Cryptomys hottentotus hottentotus) across five populations along an aridity gradient, challenging the expectation that increased aridity would lead to reduced metabolic rate, lower body temperatures and broader thermoneutral zones. No significant, consistent differences in metabolic rate, body temperature or thermal conductance were observed between populations, suggesting uniform thermoregulatory mechanisms across habitats. Instead, behavioural strategies such as huddling and torpor may play a more prominent role than physiological adaptations in managing temperature regulation and water balance. The study also observed osmoregulatory differences, with populations employing distinct behavioural cooling strategies in response to water availability. These results underscore the need for further research into the responses of subterranean species to climate change, particularly in understanding how increasing global temperatures and aridification might influence species distribution if they lack the physiological capacity to adapt to future climatic conditions.
Contest competition and injury in adult male sub-Antarctic fur seals
(Springer, 2024-05) Bester, Marthan Nieuwoudt; Rossouw, G.J.; Van Staden, Paul Jacobus; mnbester@zoology.up.ac.za
We recorded intra-sexual behaviour of adult male sub-Antarctic fur seals Arctocephalus tropicalis at Gough Island, Southern Ocean, during the 1975/76 summer breeding season. Our re-analysed data address male ‘contest competition’, which relates to the costs of intra-sexual disputes, including fights. We considered the risks/benefits of fighting through investigation of injuries (n = 353) sustained by adult males (n = 124) in fights. Injuries were predominantly on the forequarters, especially around the insertion areas of the front flippers (41%) with its sparse pelage, compared to the neck and chest areas combined (29%), an area which is well protected by thick pelage. The infliction of serious, sometimes debilitating, injuries to competitors increases a male’s access to females. Injuries predominate in injured, defeated males that gather at non-breeding sites, suggesting that injuries inflicted by dominant males were successful in excluding competing males from breeding sites.
Use of acoustic signals in Cape fur seal mother–pup reunions : individual signature, signal propagation and pup home range
(Company of Biologists, 2024-07) Martin, Mathilde; Gridley, Tess; Immerz, Antonia; Elwen, Simon H.; Charrier, Isabelle
The Cape fur seal (Arctocephalus pusillus pusillus) is one of the most colonial mammals, with colonies of up to hundreds of thousands of individuals during the breeding season. During the lactation period, mothers and pups are regularly separated as females undertake multiday foraging trips at sea. Mothers and pups use a mutual vocal recognition system to reunite after separation. Such communication is highly constrained by both high background noise and risk of individual confusion owing to the density of seals. This study aimed to experimentally assess the acoustic features relevant for mother–pup vocal identification and the propagation properties of their calls. Playback experiments revealed that mother and pup individual vocal signatures rely on both temporal and frequency parameters: amplitude and frequencymodulations, timbre and fundamental frequency (f0). This is more parameters than in any colonial species studied so far. The combinational use of acoustic features reinforces the concept that both environmental and social constraints may have acted as selective pressures on the individual vocal recognition systems. Theoretical propagation distances of mother and pup vocalisations were estimated to be below the range of distances at which mother–pup reunions can occur. This suggests that Cape fur seals may have strong abilities to extract vocal signals from the background noise, as previously demonstrated in the highly colonial king penguin. Investigating the transmission of information throughout the propagation of the signal as well as the ability of the receiving individual to decipher vocal signatures is crucial to understanding vocal recognition systems in the wild.
A mouse in the spotlight : response capacity to artificial light at night in a rodent pest species, the southern multimammate mouse (Mastomys coucha)
(Elsevier, 2024-12) Oosthuizen, Tasha; Pillay, Neville; Oosthuizen, Maria Kathleen; moosthuizen@zoology.up.ac.za
Multimammate mice are prolific breeders, can cause significant agricultural damage, and are reservoir hosts for a number of pathogens. They are nocturnal and given their success in urbanised rural environments, we were interested in how they would respond to increasingly bright anthropogenic spaces. We evaluated the locomotor activity of southern multimammate mice (Mastomys coucha), under four treatments: in an outdoor enclosure with natural light and temperature fluctuations, in a laboratory under a standard light regime, and two artificial light at night (ALAN) regimes (2 Lux) of varying proximity. The study animals remained nocturnal for the duration of the experiments. They were more active under the laboratory conditions with lower day-time light levels compared to the outdoor treatment but reduced their activity under ALAN. When the night light originated remotely, activity levels decreased by more than 50%, whereas under direct ALAN from above the cages, there was a 75% decrease in activity. The onset of activity was later during the two LAN treatments. We concluded that Mastomys coucha is strongly averse to light and show severe behavioural and circadian responses to light at night. We predict that it is unlikely that Mastomys will flourish in cities, but that they could thrive in and around dark urbanised refugia.
A frog in hot water : the effect of temperature elevation on the adrenal stress response of an African amphibian
(PeerJ Inc., 2024-08) Scheun, Juan; Venter, Leanne; Ganswindt, Andre
Amphibians, with their unique physiology and habitat requirements, are especially vulnerable to changes in environmental temperatures. While the activation of the physiological stress response can help to mitigate the impact of such habitat alteration, chronic production of elevated glucocorticoid levels can be deleterious in nature. There is no empirical evidence indicating the physiological response of African amphibians to temperature changes, where individuals are unable to emigrate away from potential stressors. To rectify this, we used the edible bullfrog (Pyxicephalus edulis) as a model species to determine the effect of elevated temperature on the adrenocortical response of the species using a recently established matrix. While a control group was kept at a constant temperature (25 ◦C) throughout the study period, an experimental group was exposed to control (25 ◦C) and elevated temperatures (30 ◦C). Mucous swabs were collected throughout the study period to determine dermal glucocorticoid (dGC) concentrations, as a proxy for physiological stress. In addition to this, individual body mass measurements were collected. The results showed that individuals within the experimental group who experienced increased temperatures had significantly elevated dGC levels compared to the control animals. Furthermore, there was a significant difference in the percentage mass change between experimental and control animals . These findings indicate the physiological sensitivity of the edible bullfrog to a thermal stressor in captivity. While this study shows the importance of proper amphibian management within the captive environment, it also highlights the coming danger of global climate change to this and similar amphibian species.
Genome sequencing of historical encephalomyocarditis viruses from South Africa links the historical 1993/4 savanna elephant (Loxodonta africana) outbreak to cryptic mastomys rodents
(MDPI, 2024-03) Van Meer, Vanessa; Paweska, Janusz Tadeusz; Swanepoel, Robert; Grobbelaar, Antoinette; Bastos, Armanda D.S.; armanda.bastos@up.ac.za
From 1993 to 1994, 64 free-ranging elephants (Loxodonta africana) succumbed to encephalomyocarditis in the Kruger National Park, South Africa, of which 83% were adult bulls. Mastomys rodents were implicated as the reservoir host of the Encephalomyocarditis virus (EMCV) based on serology and RT-PCR. However, in the absence of sequence-confirmation of both the virus and the rodent host, definitive links between the elephant outbreak strains and rodent reservoir could not be established. In this study, we generate the first reference genome sequences for three historical EMCVs isolated from two Mastomys rodents and one Mastomys-associated mite, Laelaps muricola, in Gauteng Province, South Africa, in 1961. In addition, near-complete genome sequences were generated for two elephant outbreak virus strains, for which data were previously limited to the P1 and 3D genome regions. The consensus sequence of each virus was determined using a PCRSanger sequencing approach. Phylogenetic analysis confirmed the three near-identical (99.95–99.97%) Mastomys-associated viruses to be sister to the two near-identical (99.85%) elephant outbreak strains, differing from each other at 6.4% of sites across the ~7400-nucleotide region characterised. This study demonstrates a link between Mastomys-associated viruses and the historical elephant outbreak strains and implicates Mastomys as reservoirs of EMCV in South Africa.
Where do core thalamocortical axons terminate in mammalian neocortex when there is no cytoarchitecturally distinct layer 4?
(Wiley, 2024-07) Bhagwandin, Adhil; Molnar, Zoltan; Bertelsen, Mads F.; Karlsson, Karl Æ.; Alagaili, Abdulaziz N.; Bennett, Nigel Charles; Hof, Patrick R.; Kaswera-Kyamakya, Consolate; Gilissen, Emmanuel; Jayakumar, Jaikishan; Manger, Paul R.
Although the mammalian cerebral cortex is most often described as a hexalaminar structure, there are cortical areas (primary motor cortex) and species (elephants, cetaceans, and hippopotami), where a cytoarchitecturally indistinct, or absent, layer 4 is noted. Thalamocortical projections from the core, or first order, thalamic system terminate primarily in layers 4/inner 3. We explored the termination sites of core thalamocortical projections in cortical areas and in species where there is no cytoarchitecturally distinct layer 4 using the immunolocalization of vesicular glutamate transporter 2, a known marker of core thalamocortical axon terminals, in 31 mammal species spanning the eutherian radiation. Several variations from the canonical cortical column outline of layer 4 and core thalamocortical inputs were noted. In shrews/microchiropterans, layer 4 was present, but many core thalamocortical projections terminated in layer 1 in addition to layers 4 and inner 3. In primate primary visual cortex, the sublaminated layer 4 was associated with a specialized core thalamocortical projection pattern. In primate primary motor cortex, no cytoarchitecturally distinct layer 4 was evident and the core thalamocortical projections terminated throughout layer 3. In the African elephant, cetaceans, and river hippopotamus, no cytoarchitecturally distinct layer 4 was observed and core thalamocortical projections terminated primarily in inner layer 3 and less densely in outer layer 3. These findings are contextualized in terms of cortical processing, perception, and the evolutionary trajectory leading to an indistinct or absent cortical layer 4.
Timely questions emerging in chronobiology : the circadian clock keeps on ticking
(Ubiquity Press, 2024-04-02) Chawla, Sangeeta; O'Neill, John; Knight, Marina I.; He, Yuqing; Wang, Lei; Maronde, Erik; Rodriguez, Sergio Gil; Van Ooijen, Gerben; Garbarino-Pico, Eduardo; Wolf, Eva; Dkhissi-Benyahya, Ouria; Nikhat, Anjoom; Ckakrabarti, Shaon; Youngstedt, Shawn D.; Mak, Natalie Zi-ching; Provencio, Ignacio; Oster, Henrik; Goel, Namni; Caba, Mario; Oosthuizen, Maria Kathleen; Duffield, Giles E.; Chabot, Christopher; Davis, Seth J.
Chronobiology investigations have revealed much about cellular and physiological clockworks but we are far from having a complete mechanistic understanding of the physiological and ecological implications. Here we present some unresolved questions in circadian biology research as posed by the editorial staff and guest contributors to the Journal of Circadian Rhythms. This collection of ideas is not meant to be comprehensive but does reveal the breadth of our observations on emerging trends in chronobiology and circadian biology. It is amazing what could be achieved with various expected innovations in technologies, techniques, and mathematical tools that are being developed. We fully expect strengthening mechanistic work will be linked to health care and environmental understandings of circadian function. Now that most clock genes are known, linking these to physiological, metabolic, and developmental traits requires investigations from the single molecule to the terrestrial ecological scales. Real answers are expected for these questions over the next decade. Where are the circadian clocks at a cellular level? How are clocks coupled cellularly to generate organism level outcomes? How do communities of circadian organisms rhythmically interact with each other? In what way does the natural genetic variation in populations sculpt community behaviors? How will methods development for circadian research be used in disparate academic and commercial endeavors? These and other questions make it a very exciting time to be working as a chronobiologist.
Sightings of dwarf minke whales in the Southern Hemisphere during the SOWER cruises
(International Whaling Commission, 2024-04) Kato, Hidehiro; Matsuoka, Koji; Nakamura, Gen; Best, Peter B.
This paper examines sightings of dwarf minke whales during the SOWER cruises. A total of 12 sightings were made between 1994/95 and 2003/04, across a relatively wide latitude (37°S–62°S) but limited longitude, between IWC Management Area III (0–70°E) and V (130°E–170°W), with no sightings in Area I (0–60°W) or II (60°W–120°W). Despite this low number of sightings, most were close to the Antarctic Convergence at 58°S–65°S. There may be some seasonality in their southbound migration.
The SOWER programme in the Antarctic : background, aims and objectives
(International Whaling Commission, 2024-02) Best, Peter B.; Ohsumi, S.; Kato, H.; Donovan, G.P.
The International Whaling Commission (IWC) imposed limits on the catch of Antarctic minke whales close to the start of commercial whaling in the 1970s. These management efforts were hampered by the challenge of obtaining robust estimates of population size. Contemporary whale assessments largely relied on measuring changes in availability as a result of exploitation – usually catch per unit effort (CPUE). However, this approach was largely impractical for Antarctic minke whales due to: (a) the short time series of CPUE data; (b) the setting of relatively conservative catch limits, so that changes in CPUE due to exploitation were difficult to detect; and (c) the possibility that abundance had been increasing before this time due to over‐exploitation of other baleen whales. The IWC initiated a series of assessment cruises in 1978 designed to obtain abundance estimates for targeted management areas in the Antarctic. Designed by the IWC’s Scientific Committee, these cruises were independent of whaling operations. The vessels were chartered whale catchers provided by Japan for the duration of the programme – and by the Soviet Union for a period of seven years. With the eventual participation of 86 scientists from 16 IWC member states, this programme became a key part of the International Decade of Cetacean Research (IDCR), launched in 1975 as a response to the 1972 Stockholm Resolution that called for a 10‐year moratorium on commercial whaling and the intensification of research efforts. While originally planned as ‘Discovery’ marking and sighting cruises, the programme eventually relied almost exclusively on sighting methods. Lasting over 30 years and involving three circumnavigations of the Southern Ocean, it became one of the largest whale monitoring exercises ever undertaken.

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